PITDB

Summary

TGEs : 5,017
Transcripts : 6,908
Peptides : 20,841

Description

Sample name: Trinity_P_alecto

Mixture SILAC labelled 0h, 8h, 24h post-hendra infection cell-line. RNA-seq data was collected at the same time points.

Translated Genomic Elements (TGEs)

Navigation Panel

Sample: SAMP000050

TGE Accession	TGE Type(s)	Uniprot ID(s)	Protein	Protein Description	Organism(s)
TGE0000017	5prime_extended, 5prime_shortened	L5L4S3 , P28347	L5L4S3_PTEAL	Transcriptional enhancer factor TEF-1 (Fragment)	Homo sapiens , Pteropus alecto
TGE0000247	known	L5L5W2 , Q9BSB4	L5L5W2_PTEAL	Autophagy-related protein 101	Homo sapiens , Pteropus alecto
TGE0000257	5prime_alternative_3prime_alternative, known	L5L6S2 , P09651-2 , P49312	L5L6S2_PTEAL	Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000260	5prime_alternative, known	L5KWS1 , P62854 , Q497N1	L5KWS1_PTEAL	40S ribosomal protein S26	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000264	5prime_alternative, known	L5KWS5 , P60660 , Q60605	L5KWS5_PTEAL	Myosin light polypeptide 6	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000265	5prime_alternative, known	L5KWS5 , P60660-2 , Q642K0	L5KWS5_PTEAL	Myosin light polypeptide 6	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000273	known, known variation	L5K2Z3 , P61224 , Q52L50	L5K2Z3_PTEAL	Ras-related protein Rap-1A	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000298	known	L5KX12 , P63167 , P63168	L5KX12_PTEAL	Dynein light chain 1; cytoplasmic	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000372	5prime_alternative_3prime_alternative, known	L5KIB2 , P61011	L5KIB2_PTEAL	Signal recognition particle 54 kDa protein	Homo sapiens , Pteropus alecto
TGE0000374	known	L5KIA6 , P60900	L5KIA6_PTEAL	Proteasome subunit alpha type	Homo sapiens , Pteropus alecto
TGE0000391	5prime_shortened, known	L5KM99 , P62158 , P62204	L5KM99_PTEAL	Calmodulin	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000504	5prime_shortened_3prime_alternative, known	L5L5H3 , P67812	L5L5H3_PTEAL	Signal peptidase complex catalytic subunit SEC11	Homo sapiens , Pteropus alecto
TGE0000661	known	L5KP60 , P62244 , Q5M9M4	L5KP60_PTEAL	40S ribosomal protein S15a	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000726	known, known variation	L5JN65 , P60842 , Q5F2A7	L5JN65_PTEAL	Eukaryotic initiation factor 4A-II	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000759	known	L5JS47 , P84098 , Q5I0T8	L5JS47_PTEAL	Ribosomal protein L19	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000763	known	L5JQ06 , Q9NYR9	L5JQ06_PTEAL	NF-kappa-B inhibitor-interacting Ras-like protein 2	Homo sapiens , Pteropus alecto
TGE0000769	known	L5JPX3 , P61289 , Q4FK54	L5JPX3_PTEAL	Proteasome activator complex subunit 3	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000916	known	L5KL61 , P62993	L5KL61_PTEAL	Growth factor receptor-bound protein 2	Homo sapiens , Pteropus alecto
TGE0000966	5prime_alternative, known	L5K4K7 , P62314 , P62315	L5K4K7_PTEAL	Small nuclear ribonucleoprotein Sm D1	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000984	3prime_alternative, known	L5K596 , Q96P16	L5K596_PTEAL	GTP-binding nuclear protein Ran	Homo sapiens , Pteropus alecto
TGE0001056	5prime_alternative, known	L5KM75 , P62316 , Q14AF6	L5KM75_PTEAL	Small nuclear ribonucleoprotein Sm D2	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001085	known	L5L6P2 , P62841 , P62843	L5L6P2_PTEAL	40S ribosomal protein S15	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001138	3prime_alternative, known	L5KWC8 , P62987	L5KWC8_PTEAL	Ubiquitin	Homo sapiens , Pteropus alecto
TGE0001191	known	L5L530 , Q99873-4	L5L530_PTEAL	Protein arginine N-methyltransferase 1	Homo sapiens , Pteropus alecto
TGE0001203	known	L5KCS9 , P26368-2 , Q80XR5	L5KCS9_PTEAL	Splicing factor U2AF 65 kDa subunit	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001225	3prime_alternative, known	L5K1A2 , P61026 , Q4FJL0	L5K1A2_PTEAL	Ras-related protein Rab-8B	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001230	known	L5KTG1 , P62140 , P62141	L5KTG1_PTEAL	Serine/threonine-protein phosphatase	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001290	5prime_shortened, known	L5JYV7 , O00487 , O35593	L5JYV7_PTEAL	26S proteasome non-ATPase regulatory subunit 14	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001320	5prime_shortened, known	L5K245 , Q7L1Q6-4 , Q9CQC6	L5K245_PTEAL	Basic leucine zipper and W2 domain-containing protein 1	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001355	5prime_shortened, known	L5K139 , P27348	L5K139_PTEAL	14-3-3 protein beta/alpha	Homo sapiens , Pteropus alecto
TGE0001363	known	L5KTA1 , P59708 , Q9Y3B4	L5KTA1_PTEAL	Pre-mRNA branch site protein p14	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001624	3prime_alternative, known	L5KB37 , P83870 , Q7RTV0	L5KB37_PTEAL	PHD finger-like domain-containing protein 5A	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001625	known, novel	- , P55769	-	-	Homo sapiens , Pteropus alecto
TGE0001659	5prime_shortened, known	L5JL92 , O70274 , Q12974	L5JL92_PTEAL	Protein tyrosine phosphatase type IVA 1	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001660	known	L5L4X6 , Q9Y295	L5L4X6_PTEAL	Developmentally-regulated GTP-binding protein 1	Homo sapiens , Pteropus alecto
TGE0001690	5prime_shortened, known	L5K984 , P62910 , P62911	L5K984_PTEAL	60S ribosomal protein L32	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001738	known	B2RXQ8 , L5K8K1 , Q6UXN9	L5K8K1_PTEAL	WD repeat-containing protein 82	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001750	known, novel	- , P83731 , Q8BP67	-	-	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001762	known	L5KVG3 , Q9Y265	L5KVG3_PTEAL	RuvB-like helicase	Homo sapiens , Pteropus alecto
TGE0001765	5prime_shortened, known	L5KWL8 , P62633 , Q3ULK8	L5KWL8_PTEAL	Cellular nucleic acid-binding protein	Homo sapiens , Mus musculus , Pteropus alecto