PITDB

Summary

TGEs : 4,516
Transcripts : 4,961
Peptides : 16,362

Description

Sample name: 10_C5LH8ACXX_TAGCTT_L005

Replicate 1. RNA-Seq data was collected at 0h post nelsonbay virus infection. MS-data was SILAC-light labelled.

Translated Genomic Elements (TGEs)

Navigation Panel

Sample: SAMP000002

TGE Accession	TGE Type(s)	Uniprot ID(s)	Protein	Protein Description	Organism(s)
TGE0000156	5prime_shortened_3prime_shortened, known	L5KWC7 , Q15185	L5KWC7_PTEAL	DNA primase	Homo sapiens , Pteropus alecto
TGE0000172	known	A2RTT4 , L5JTB9 , P61088	L5JTB9_PTEAL	Ubiquitin-conjugating enzyme E2 N	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000257	5prime_alternative_3prime_alternative, known	L5L6S2 , P09651-2 , P49312	L5L6S2_PTEAL	Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000260	5prime_alternative, known	L5KWS1 , P62854 , Q497N1	L5KWS1_PTEAL	40S ribosomal protein S26	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000264	5prime_alternative, known	L5KWS5 , P60660 , Q60605	L5KWS5_PTEAL	Myosin light polypeptide 6	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000273	known, known variation	L5K2Z3 , P61224 , Q52L50	L5K2Z3_PTEAL	Ras-related protein Rap-1A	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000298	known	L5KX12 , P63167 , P63168	L5KX12_PTEAL	Dynein light chain 1; cytoplasmic	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000303	5prime_alternative_3prime_alternative, known	L5K596 , P62826	L5K596_PTEAL	GTP-binding nuclear protein Ran	Homo sapiens , Pteropus alecto
TGE0000374	known	L5KIA6 , P60900	L5KIA6_PTEAL	Proteasome subunit alpha type	Homo sapiens , Pteropus alecto
TGE0000391	5prime_shortened, known	L5KM99 , P62158 , P62204	L5KM99_PTEAL	Calmodulin	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000454	5prime_alternative, known	L5KED0 , P84090 , Q4FZH7	L5KED0_PTEAL	Enhancer of rudimentary like protein	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000475	known	L5K1B7 , P55081	L5K1B7_PTEAL	Microfibrillar-associated protein 1	Homo sapiens , Pteropus alecto
TGE0000534	known	L5K149 , Q02750	L5K149_PTEAL	Dual specificity mitogen-activated protein kinase kinase 1	Homo sapiens , Pteropus alecto
TGE0000593	known	L5KGY6 , P60510 , Q3UNF2	L5KGY6_PTEAL	Serine/threonine-protein phosphatase	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000661	known	L5KP60 , P62244 , Q5M9M4	L5KP60_PTEAL	40S ribosomal protein S15a	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000759	known	L5JS47 , P84098 , Q5I0T8	L5JS47_PTEAL	Ribosomal protein L19	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000769	known	L5JPX3 , P61289 , Q4FK54	L5JPX3_PTEAL	Proteasome activator complex subunit 3	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000770	known	L5JQ27 , P61353 , Q5BLJ9	L5JQ27_PTEAL	60S ribosomal protein L27	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000808	5prime_shortened, known	L5KNG7 , P63173	L5KNG7_PTEAL	60S ribosomal protein L38	Homo sapiens , Pteropus alecto
TGE0000916	known	L5KL61 , P62993	L5KL61_PTEAL	Growth factor receptor-bound protein 2	Homo sapiens , Pteropus alecto
TGE0000966	5prime_alternative, known	L5K4K7 , P62314 , P62315	L5K4K7_PTEAL	Small nuclear ribonucleoprotein Sm D1	Homo sapiens , Mus musculus , Pteropus alecto
TGE0000988	5prime_alternative, known	L5K4C6 , P18621	L5K4C6_PTEAL	60S ribosomal protein L17	Homo sapiens , Pteropus alecto
TGE0001056	5prime_alternative, known	L5KM75 , P62316 , Q14AF6	L5KM75_PTEAL	Small nuclear ribonucleoprotein Sm D2	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001105	known	L5L4A9 , Q9BZL1 , Q9EPV8	L5L4A9_PTEAL	Ubiquitin-like protein 5	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001203	known	L5KCS9 , P26368-2 , Q80XR5	L5KCS9_PTEAL	Splicing factor U2AF 65 kDa subunit	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001205	5prime_shortened, known	L5L5A2 , P46782	L5L5A2_PTEAL	40S ribosomal protein S5	Homo sapiens , Pteropus alecto
TGE0001225	3prime_alternative, known	L5K1A2 , P61026 , Q4FJL0	L5K1A2_PTEAL	Ras-related protein Rab-8B	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001230	known	L5KTG1 , P62140 , P62141	L5KTG1_PTEAL	Serine/threonine-protein phosphatase	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001275	known	L5JZ14 , P61158	L5JZ14_PTEAL	Actin-related protein 3	Homo sapiens , Pteropus alecto
TGE0001290	5prime_shortened, known	L5JYV7 , O00487 , O35593	L5JYV7_PTEAL	26S proteasome non-ATPase regulatory subunit 14	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001320	5prime_shortened, known	L5K245 , Q7L1Q6-4 , Q9CQC6	L5K245_PTEAL	Basic leucine zipper and W2 domain-containing protein 1	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001355	5prime_shortened, known	L5K139 , P27348	L5K139_PTEAL	14-3-3 protein beta/alpha	Homo sapiens , Pteropus alecto
TGE0001383	5prime_extended, known	L5KT55 , P62820 , Q0PD67	L5KT55_PTEAL	Ras-related protein Rab-1A (Fragment)	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001625	known, novel	- , P55769	-	-	Homo sapiens , Pteropus alecto
TGE0001655	known, novel	- , P62318 , P62320	-	-	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001659	5prime_shortened, known	L5JL92 , O70274 , Q12974	L5JL92_PTEAL	Protein tyrosine phosphatase type IVA 1	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001660	known	L5L4X6 , Q9Y295	L5L4X6_PTEAL	Developmentally-regulated GTP-binding protein 1	Homo sapiens , Pteropus alecto
TGE0001687	known	L5KBK1 , Q9P0I2	L5KBK1_PTEAL	Transmembrane protein 111	Homo sapiens , Pteropus alecto
TGE0001690	5prime_shortened, known	L5K984 , P62910 , P62911	L5K984_PTEAL	60S ribosomal protein L32	Homo sapiens , Mus musculus , Pteropus alecto
TGE0001738	known	B2RXQ8 , L5K8K1 , Q6UXN9	L5K8K1_PTEAL	WD repeat-containing protein 82	Homo sapiens , Mus musculus , Pteropus alecto